1993

• Roháček, J., 1993: Two new Afrotropical genera of Anthomyzidae (Diptera), with descriptions of seven new species. Annals of Natal Museum, 34 (1): 157–190. Full article: .

1996

• Roháček, J., 1996: Revision of Palaearctic Stiphrosoma, including the Anthomyza laeta-group (Diptera: Anthomyzidae). European Journal of Entomology, 93 (1): 89–120. Full article:

1998

• Roháček, J., 1998: Taxonomic limits, phylogeny and higher classification of Anthomyzidae (Diptera), with special regard to fossil record. European Journal of Entomology, 95 (1): 141–177. Full article: .

2004

• Roháček, J., 2004: Revision of the genus Amygdalops Lamb, 1914 (Diptera: Anthomyzidae) of the Afrotropical Region. African Invertebrates, 45: 157–221. Full article: .

2006

• Roháček, J., 2006: A monograph of Palaearctic Anthomyzidae (Diptera) Part 1. Časopis Slezského Zemského Muzea, Opava (A) 55, supplement 1: 1–328.

2007

• Roháček, J., 2007: Zealantha thorpei gen. et sp. nov. (Diptera: Anthomyzidae), first family representative from New Zealand. Zootaxa, 1576: 1–13. Full article: .

2008

• Roháček, J., 2008: Revision of the genus Amygdalops Lamb, 1914 (Diptera, Anthomyzidae) of the Oriental, Australasian and Oceanian Regions. Acta Zoologica Academiae Scientiarum Hungaricae, 54 (4): 325–400. Full article: .
• Roháček, J. & Barber K.N., 2008: New reduced-winged species of Mumetopia, with analysis of this genus, Chamaebosca and allied genera (Diptera: Anthomyzidae). Acta Societatis Zoologicae Bohemicae 72: 191–215. Full article: .

• Roháček, J.; Barber, K.N. 2013: A worldwide review of the genus Arganthomyza Roháček, with revision of the Nearctic species (Diptera: Anthomyzidae). Zootaxa 3604(1): 1–72. DOI: 10.11646/zootaxa.3604.1.1 Reference page. 

2011

• Roháček, J. 2011: Taxonomy of Stenomicra cogani, with description of S. gracilior sp. nov. from Turkey and comparative morphology of terminalia in Stenomicridae (Diptera). Acta Entomologica Musei Nationalis Pragae, 51(2): 697–722. abstract==

2016

• Roháček, J. 2016. Herniosina Roháček: revised concept, two new species, new key and atlas of male and female terminalia (Diptera, Sphaeroceridae). ZooKeys 609: 69-106. DOI: 10.3897/zookeys.609.9459 . Reference page. 

• Roháček, J. & Barber, K.N. 2016. Nearctic Anthomyzidae: a monograph of Anthomyza and allied genera (Diptera). Acta Entomologica Musei Nationalis Pragae 56(Supplementum): 1-412. full article (PDF). Reference page. 

2018

• Pérez-de la Fuente, R., Hoffeins, C. & Roháček, J. 2018. A new Acartophthalmites Hennig from Eocene Baltic amber (Diptera, Acalyptratae). ZooKeys 737: 125–139. DOI: 10.3897/zookeys.737.20639 . Reference page. 

2019

• Oboňa, J., Syrcha, O., Greš, S., Heřman, P., Manko, P., Roháček, J., Šestáková, A., Šlapák, J. & Hromada, M. 2019. A revised annotated checklist of louse flies (Diptera, Hippoboscidae) from Slovakia. Zookeys, 862: 129–152. DOI: 10.3897/zookeys.862.25992 Reference page.