1855

• Mueller, F.J.H. von. 1855. Description of fifty new Australian plants, chiefly from the colony of Victoria. Transactions and Proceedings of the Victorian Institute for the Advancement of Science 1: 28–48, 114–135. BHL Reference page. 

1858

• Mueller, F.v. 1858. Account of some new Australian plants. Transactions of the Philosophical Institute of Victoria 2: 62–77. BHL Reference page. 
• Mueller, F. 1858–1882. Fragmenta Phytographiae Australiae, 94 parts in 11 volumes.

• Mueller, F.v. 1858–1859. Fragmenta Phytographiae Australiae. Vol. 1. 252 pp. J. Ferres, Melbourne. BHL Reference page. 

1859

• Mueller, F. 1859. Report on the plants collected during Mr. Babbage's expedition into the north-western interior of South Australia in 1858. 24 pp. BHL Reference page. 

1860

• Mueller, F.J.H. von. 1860. Essay on the plants collected by Mr Eugene Fitzalan during Lieut. Smith's Expedition to the Estuary of the Burdekin. BHL Reference page. 

1861

• Mueller, F. 1860–1861. Fragmenta Phytographiae Australiae. Vol. 2. 199 pp. J. Ferres, Melbourne. BHL Reference page. 

1862

• Mueller, F.J.H.v. in Landsborough, W. 1862. A systematic arrangement of the plants noticed around the Gulf of Carpentaria, from the Roper to the Gilbert River, including those collected during Mr. Landsborough's expedition. Journal of Landsborough's Expedition from Carpentaria in Search of Burke and Wills: Appendix. (online) Reference page. 

• Mueller, F.v. 1862–1863. Fragmenta Phytographiae Australiae. Vol. 3. 177 pp. J. Ferres, Melbourne. BHL Reference page. 

1863

• Mueller, F.v. 1863–1864. Fragmenta Phytographiae Australiae. Vol. 4. 195 pp. J. Ferres, Melbourne. BHL Reference page. 

1865

• Mueller, F. 1865–1866. Fragmenta Phytographiae Australiae. Vol. 5. 240 pp. J. Ferres, Melbourne. BHL Reference page. 

1869

• Mueller, F.v. 1867–1869. Fragmenta Phytographiae Australiae. Vol. 6. J. Ferres, Melbourne. BHL Reference page. 

• Mueller, F.v. 1869–1871. Fragmenta Phytographiae Australiae. Vol. 7. 166 pp. J. Ferres, Melbourne. BHL Reference page. 

1872

• Mueller, F.v. 1872–1874. Fragmenta Phytographiae Australiae. Vol. 8. 240 pp. J. Ferres, Melbourne. BHL Reference page. 

1874

• Mueller, F.v 1874. Additions to the lists of the principal timber trees and other select plants for Victorian industrial culture. Melbourne, Stillwell and Knight. (online) Reference page. 

1875

• Mueller, F.v. 1875. Fragmenta Phytographiae Australiae. Vol. 9. 216 pp. J. Ferres, Melbourne. BHL Reference page. 

1876

• Mueller, F.v. 1876–1877. Fragmenta Phytographiae Australiae 10(81–87): 1. BHL. Reference page. 

1877

• Mueller, F. von 1877. List of the plants obtained during Mr. C. Giles's travels in Australia in 1875 and 1876. Journal of Botany, British and Foreign 15: 269–281. BHL Reference page. 

1878

• Mueller, F. 1878–1881. Fragmenta Phytographiae Australiae. Vol. 11. 132 pp. J. Ferres, Melbourne. BHL Reference page. 

1881

• Mueller, F.v. 1881. Plants of North-Western Australia. Perth: Richard Pether. BHL Reference page. 

1882

• Mueller, F.v. 1882. Systematic census of Australian plants, with chronologic, literary and geographic annotations. Melbourne: M'Carron, Bird & Co. BHL Reference page. 

• Mueller, F. 1882. Fragmenta Phytographiae Australiae. Vol. 12. 25 pp. J. Ferres, Melbourne. BHL Reference page. 

• Mueller, F.v. 1882. Definitions for some new Australian plants. Southern Science Record 2: 55–56, 72–74, 97–98, 149–152, 171–172, 230–231, 273–275. BHL Reference page. 

1883

• Mueller, F.v. & Tate, R. 1883. Diagnoses of some new plants of South Australia. Transactions and Proceedings of the Royal Society of South Australia 6: 107–109. BHL Reference page. 

1884

• Mueller, F.v. 1884. Plants collected in Central Australia. – In: Winnecke, C. Mr. Winnecke's Explorations during 1883. Adelaide, Government Printer.: 15–16. BHL (Reprinted 1886. in: Transactions and Proceedings of the Royal Society of South Australia 8: 10–13. BHL) Reference page. 

1885

• Mueller, F.v. 1885. Definitions of some new Australian plants. Southern Science Record ser. 2,1 (or 3). Reference page. 
• Mueller, F.v. 1885. Description of a new saltbush from central Australia. Extra print from The Australasian Chemist and Druggist 8: 41.

1886

• Mueller, F.v. 1886. Descriptions of new Australian plants. The Victorian Naturalist 3(7): 92–93. BHL Reference page. 

• Mueller, F.v. 1886. Neue Litteratur: Description of a new saltbush from central Australia. Botanisches Centralblatt 26: 227–228. BHL Reference page. 

• Mueller, F.v. 1886. New Australian plants. Australasian Journal of Pharmacy 1(6): 429–431. BHL Reference page. 

1887

• Mueller, F. 1887. Plants collected in capricornic Western Australia, by H. S. King, Esq., and recorded by Baron von Mueller, K.C.M.G., M & Ph.D., F.R.S. Transactions and Proceedings of the Royal Society of Victoria 23: 49–57. BHL Reference page. 

1888

• Mueller, F. 1888. Description of some hitherto unknown Australian plants. Transactions and proceedings of the Royal Society of Victoria 24: 168–174. BHL Reference page. 

• Mueller, F.J.H. von 1888. Descriptions of two hitherto unrecorded west Australian plants. Proceedings of the Linnean Society of New South Wales, Series 2 3: 162–164. BHL Reference page. 

• Mueller, F.v. 1888. Notes on some salsolaceous plants. The Victorian Naturalist 5(7): 96–98. BHL Reference page. 

1889

• Mueller, F.v. 1889. Second Systematic Census of Australian Plants, with chronologic, literary and geographic annotations. Melbourne: McCarron. Bird & Co. BHL Reference page. 

• Mueller, F.v. 1889–1891. Iconography of Australian Salsolaceous Plants. Melbourne, Brain. BHL Reference page. 

1890

• Mueller, F.v. 1890. Descriptions of new Australian plants, with occasional other annotations (continued). The Victorian Naturalist 7(4): 46–50. BHL Reference page. 

• Mueller, F.v. 1890. Descriptions of new Australian plants, with occasional other annotations. (continued). The Victorian Naturalist 7(5): 66–68. BHL Reference page. 

1896

• Mueller, F.v. & Tate, R. 1896. Botany. Phanerogams and Vascular Cryptogams. Transactions and Proceedings of the Royal Society of South Australia 16: 333–383. BHL Reference page. 

For more multimedia, look at Ferdinand von Müller on Wikimedia Commons.